Bump the uv group with 7 updates by dependabot[bot] · Pull Request #45 · WayScience/ome-arrow

dependabot · 2026-03-01T11:16:40Z

Bumps the uv group with 7 updates:

Package	From	To
pandas	`3.0.0`	`3.0.1`
pyarrow	`23.0.0`	`23.0.1`
pyvista	`0.47.0`	`0.47.1`
vortex-data	`0.58.0`	`0.60.0`
poethepoet	`0.41.0`	`0.42.1`
isort	`7.0.0`	`8.0.1`
jupyterlab	`4.5.4`	`4.5.5`

Updates pandas from 3.0.0 to 3.0.1

Release notes

Sourced from pandas's releases.

pandas 3.0.1

We are pleased to announce the release of pandas 3.0.1. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0.0 supports Python 3.11 and higher. The release can be installed from PyPI:
python -m pip install --upgrade pandas==3.0.*
Or from conda-forge
conda install -c conda-forge pandas=3.0
Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

Commits

e04b26f RLS: 3.0.1 (#64206)
47909e6 [backport 3.0.x] ENH: Add item() method to ExtensionArray class (#64134) (#64...
a061bfd Backport PR #64199 on branch 3.0.x (DOC: cleanup 3.0.1 whatsnew) (#64201)
085a385 [backport 3.0.x] BUG: Fix read_hdf failing on generic datetime64 dtype (#6400...
5f17047 [backport 3.0.x] BUG: use fill_null fallback for bug in pyarrow 21 on Windows...
0d3a8cb Backport PR #64122 on branch 3.0.x (REG: Allow RE2 syntax in str.contains and...
78e1917 Backport PR #64185 on branch 3.0.x (TST: remove fixed xfail for PyArrow 23.0....
75a42ca Backport PR #64168 on branch 3.0.x (TST: add legacy file generation and tests...
46d443f Backport PR #64092 on branch 3.0.x (BUG: DataFrame.loc fills b'' instead of N...
9d67932 Backport PR #64068 on branch 3.0.x (BUG: fixed to_timedelta with list of int ...
Additional commits viewable in compare view

Updates pyarrow from 23.0.0 to 23.0.1

Release notes

Sourced from pyarrow's releases.

Apache Arrow 23.0.1

Release Notes URL: https://arrow.apache.org/release/23.0.1.html

Apache Arrow 23.0.1 RC0

Release Notes: Release Candidate: 23.0.1 RC0

Commits

82a374e MINOR: [Release] Update versions for 23.0.1
c1ae37c MINOR: [Release] Update .deb/.rpm changelogs for 23.0.1
8f6e557 MINOR: [Release] Update CHANGELOG.md for 23.0.1
4e16a1a GH-49159: [C++][Gandiva] Detect overflow in repeat() (#49160)
985621d GH-48817 [R][C++] Bump C++20 in R build infrastructure (#48819)
1bea06a GH-49024: [CI] Update Debian version in .env (#49032)
147bcd6 GH-49156: [Python] Require GIL for string comparison (#49161)
e4f922b GH-49138: [Packaging][Python] Remove nightly cython install from manylinux wh...
f9376e4 GH-49003: [C++] Don't consider out_of_range an error in float parsing (#49095)
ab2c0ad GH-49044: [CI][Python] Fix test_download_tzdata_on_windows by adding required...
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Updates pyvista from 0.47.0 to 0.47.1

Release notes

Sourced from pyvista's releases.

v0.47.1

What's Changed

Bug fixes or behavior changes

Remove relpath from deprecate_positional_args decorator (#8345) by @jcapriot, backported in pyvista/pyvista#8346

Documentation

Remove assertions from mesh_validation example (#8328) by @user27182, backported in pyvista/pyvista#8334

Maintenance

Upper pin trame-vtk (#8325) by @edabor, backported in pyvista/pyvista#8329

Add Python 3.14 classifier (#8316) by @user27182, backported in pyvista/pyvista#8330

Full Changelog: pyvista/pyvista@v0.47.0...v0.47.1

Commits

f0fc516 Bump version to 0.47.1 (#8351)
7e89dbf Remove relpath from deprecate_positional_args decorator (#8345) (#8346)
d0faf60 Remove assertions from mesh_validation example (#8328) (#8334)
9837b2a Add Python 3.14 classifier (#8316) (#8330)
89dcb51 Upper pin trame-vtk (#8325) (#8329)
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Updates vortex-data from 0.58.0 to 0.60.0

Release notes

Sourced from vortex-data's releases.

0.60.0 largely involves unifying our vtable concepts as per the internal docs page in order to lay the groundwork for future extension points. Most notably: full Extension DType support, as well as AggregateFns.

Changes

⚠️ Breaks

ScalarFn VTable (#6679) @gatesn

Extension Scalar VTable (#6680) @connortsui20

Rename spawn_blocking -> spawn_blocking_io (#6678) @gatesn

Unify ExtVTable per vtable design doc (#6662) @gatesn

Add an extension module to vortex (#6624) @connortsui20

break: clean up compare (#6591) @joseph-isaacs

Merge vortex-dtype into vortex-array (#6582) @connortsui20

break: clean up compute (#6572) @joseph-isaacs

Bump Rust MSRV to 1.90 (#6597) @robert3005

break[array]: lazy list_contains (#6571) @joseph-isaacs

✨ Features

Support building duckdb from a hash, including CI (#6658) @myrrc

DuckDB to use the Scan API (#6652) @gatesn

Use Scan API (#6391) @gatesn

feat[gpu]: multi-stage dynamic dispatch with plan builder (#6636) @0ax1

DuckDB lifetimes (#6620) @joseph-isaacs

Expose table scan progress to DuckDB (#6596) @myrrc

expose Executor, AbortHandle, AbortHandleRef, and Handle (#6595) @danking

🚀 Performance

Avoid redundant chunk execution in pack_struct_chunks (#6682) @palaska

read future to skip polled and dropped events for completed requests (#6667) @onursatici

perf[gpu]: speed up dyn dispatch run-end kernel (#6665) @0ax1

Route default append_to_builder through full execution loop (#6655) @palaska

Add take-based rebuild strategy for ListView with small lists (#6492) @palaska

oncelock shared array for zero cost access after materialisation (#6653) @onursatici

oncelock shared array future on cuda flat layout (#6585) @onursatici

cow buffers on array decode (#6590) @onursatici

Extract to buffer once in list_contains (#6642) @palaska

perf(layout): add empty-range fast paths in chunked reader (#6513) @caicancai

chore[btrblocks]: more precise FoR expected_compression_ratio (#6301) @joseph-isaacs

perf: remove double execute in exprs (#6608) @joseph-isaacs

Use approx footer size for caching instead of walking the layout tree (#6601) @robert3005

do not double validate the flatbuffer on the cuda layout (#6583) @onursatici

increase default nvme coalescing (#6586) @onursatici

decoding stats should lock once (#6587) @onursatici

perf[array]: chunked take with bounded compute graph (#6589) @joseph-isaacs

🐛 Bug Fixes

... (truncated)

Commits

24f57f6 ScalarFn VTable (#6679)
ee29169 cuda ctx bind to thread before unsafe (#6681)
a13a0ed Avoid redundant chunk execution in pack_struct_chunks (#6682)
6c7cd94 keep DropOnSync alive until after dispatching for cuda slices (#6673)
ea7804c Extension Scalar VTable (#6680)
d59d334 Rename spawn_blocking -> spawn_blocking_io (#6678)
1eb7f4d Convert &mut to & for DuckDB GlobalData (#6634)
7a6717d DuckDB: test curl impl, don't auto-load extensions (#6677)
8a9185a resize FSST compressor buffer to be large enough for largest string (#6676)
7bc4d0b chore: exclude cuda gen files from auto-formatting (#6671)
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Updates poethepoet from 0.41.0 to 0.42.1

Release notes

Sourced from poethepoet's releases.

0.42.1

Enhancements

Add exact option for uv executor by @charlesbmi in nat-n/poethepoet#365

Completion script fixes

Isolate zsh completion task options from global options by @nat-n in nat-n/poethepoet#364

Fix completion script edge case handling by @nat-n in nat-n/poethepoet#366

[!IMPORTANT] You must follow the instructions to (re)install the completion script for your preferred shell environment to benefit from the completion script fixes

New Contributors

@charlesbmi made their first contribution in nat-n/poethepoet#365

Full Changelog: nat-n/poethepoet@v0.42.0...v0.42.1

0.42.0

Enhancements

Better zsh completion caaching with max hits per cache and proper TTL before refresh by @nat-n in nat-n/poethepoet#360

Officially Support Python 3.14 by @gruebel in nat-n/poethepoet#362

Add completion script for PowerShell by @NSPC911 in nat-n/poethepoet#358

[!IMPORTANT] You must follow the instructions to (re)install the completion script for your preferred shell environment to benefit from the enhancements for zsh or PowerShell

New Contributors

@gruebel made their first contribution in nat-n/poethepoet#362

@NSPC911 made their first contribution in nat-n/poethepoet#358

Full Changelog: nat-n/poethepoet@v0.41.0...v0.42.0

Commits

4979272 Bump version to 0.42.1
1f40807 fix: completion script edge case handling (#366)
c67a858 feat(uv): add exact option for uv executor (#365)
8f4d5c4 fix: isolate zsh completion task options from global options (#364)
b1589da Bump version to 0.42.0
0646d44 feat: powershell completions (#358)
56293a4 chore: support Python 3.14 (#362)
804c675 Add cache TTL and max hits to zsh completion caching (#360)
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Updates isort from 7.0.0 to 8.0.1

Release notes

Sourced from isort's releases.

8.0.0

Changes

Update CHANGELOG for version 8.0.0 (#2460) @DanielNoord

Fix edge case of __future__ import. (#2458) @skv0zsneg

Fix the Plone profile to be compatible with black (#2457) @ale-rt

typo fix (#2450) @jsta

Remove the setuptools plugin (#2427) @DanielNoord

Turn some warnings into errors in test suite (#2449) @DanielNoord

chore: replace black with ruff in clean.sh (#2448) @joao-faria-dev

feat!: remove old finders flag and legacy finder logic (#2446) @joao-faria-dev

Fix whitespace insensitive check triggering on tabs (#2437) @robsdedude

Fix line separator detection not considering form feed as white space (#2436) @robsdedude

Fix #1964: lines_before_import sometimes ignored (#1965) @robsdedude

Remove reference to 3.9 in README (#2434) @DanielNoord

🚀 Features

Ensure multiprocessing.Pool is always closed and joined (#2442) @DanielNoord

👷 Continuous Integration

Simplify CI by putting similar steps into a single action file (#2444) @DanielNoord

📦 Dependencies

Bump actions/checkout from 5 to 6 in the github-actions group (#2451) @dependabot[bot]

Bump astral-sh/setup-uv from 6 to 7 in the github-actions group (#2441) @dependabot[bot]

Changelog

Sourced from isort's changelog.

Changelog

NOTE: isort follows the semver versioning standard. Find out more about isort's release policy here.

Unreleased

8.0.0 February 19 2026

Removed --old-finders and --magic-placement flags and old_finders configuration option. The legacy finder logic that relied on environment introspection has been removed (#2445) @joao-faria-dev

Update the plone profile to not clash with black (#2456) @ale-rt

6.1.0 October 1 2025

Add python 3.14 classifier and badge (#2409) @staticdev

Drop use of non-standard pkg_resources API (#2405) @dvarrazzo

6.0.1 Febuary 26 2025

Add OSError handling in find_imports_in_file (#2331) @kobarity

6.0.0 January 27 2025

Remove support for Python 3.8 (#2327) @DanielNoord

Python 3.13 support (#2306) @mayty

Speed up exists_case_sensitive calls (#2264) @correctmost

Ensure that split_on_trailing_comma works with as imports (#2340) @DanielNoord

Black profile: enable magic comma (#2236) @MrMino

Update line_length and single_line_exclusions in google profile (#2149) @jagapiou

Allow --diff to be used with --jobs (#2302) @mnakama

Fix wemake profile to have correct character limit (#2241) @sobolevn

Fix sort_reexports code mangling (#2283) @Helveg

Fix correct group by package tokenization (#2136) @glasnt

5.13.2 December 13 2023

Apply the bracket fix from issue #471 only for use_parentheses=True (#2184) @bp72

Confine pre-commit to stages (#2213) @davidculley

Fixed colors extras (#2212) @staticdev

5.13.1 December 11 2023

Fixed integration tests (#2208) @bp72

Fixed normalizing imports from more than one level of parent modules (issue/2152) (#2191) @bp72

Remove optional dependencies without extras (#2207) @staticdev

5.13.0 December 9 2023

Cleanup deprecated extras (#2089) @staticdev

... (truncated)

Commits

a333737 Merge pull request #2463 from FinlayTheBerry/issue/2461
878ba7e Added compression to stdlibs for Python 3.14 in isort/stdlibs/py314.py
b5f06a7 Merge pull request #2459 from Fridayai700/fix-unindented-comment-corruption
3459bde Merge pull request #2460 from PyCQA/DanielNoord-patch-1
6e70bb6 Update CHANGELOG for version 8.0.0
fd2514b Fix unindented comments being corrupted in indented blocks
b0f2dab Merge pull request #2458 from skv0zsneg/issue/1882
313797b Fix lint.
7d3a6f5 Add ignore for cyclomatic complexity check.
6b9f895 Remove debug prints.
Additional commits viewable in compare view

Updates jupyterlab from 4.5.4 to 4.5.5

Release notes

Sourced from jupyterlab's releases.

v4.5.5

4.5.5

(Full Changelog)

Bugs fixed

Fix theme settings broken in non-English locales #18530 (@apoorvdarshan)

Fix comms subshell resource management on disposal and when changing settings #18531 (@krassowski)

Upgrade @codemirror/view, fixing slow selection when line wrapping is enabled #18479 (@krassowski)

Only turn off overflow anchor when windowing is active #18503 (@jasongrout)

Fix table of contents navigation for Markdown files #18411 (@itsmevichu)

Maintenance and upkeep improvements

Update to marked 17.0.2 and mermaid 11.12.3 #18532 (@bollwyvl, @krassowski)

Contributors to this release

The following people contributed discussions, new ideas, code and documentation contributions, and review. See our definition of contributors.

(GitHub contributors page for this release)

@apoorvdarshan (activity) | @bollwyvl (activity) | @itsmevichu (activity) | @jasongrout (activity) | @krassowski (activity)

Commits

72d29f4 [ci skip] Publish 4.5.5
4a223c0 Backport PR #18530 on branch 4.5.x (Fix theme settings broken in non-English ...
2d54b65 Backport PR #18531 on branch 4.5.x (Fix comms subshell resource management on...
5f01903 Update to marked 17.0.2 and mermaid 11.12.3 (#18532)
1fa6809 Backport PR #18479 on branch 4.5.x (Upgrade @codemirror/view, fixing slow sel...
277f814 Backport PR #18503 on branch 4.5.x (Only turn off overflow anchor when window...
b824b96 Backport PR #18411 on branch 4.5.x (Fix table of contents navigation for Mark...
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Bumps the uv group with 7 updates: | Package | From | To | | --- | --- | --- | | [pandas](https://github.com/pandas-dev/pandas) | `3.0.0` | `3.0.1` | | [pyarrow](https://github.com/apache/arrow) | `23.0.0` | `23.0.1` | | [pyvista](https://github.com/pyvista/pyvista) | `0.47.0` | `0.47.1` | | [vortex-data](https://github.com/spiraldb/vortex) | `0.58.0` | `0.60.0` | | [poethepoet](https://github.com/nat-n/poethepoet) | `0.41.0` | `0.42.1` | | [isort](https://github.com/PyCQA/isort) | `7.0.0` | `8.0.1` | | [jupyterlab](https://github.com/jupyterlab/jupyterlab) | `4.5.4` | `4.5.5` | Updates `pandas` from 3.0.0 to 3.0.1 - [Release notes](https://github.com/pandas-dev/pandas/releases) - [Commits](pandas-dev/pandas@v3.0.0...v3.0.1) Updates `pyarrow` from 23.0.0 to 23.0.1 - [Release notes](https://github.com/apache/arrow/releases) - [Commits](apache/arrow@apache-arrow-23.0.0...apache-arrow-23.0.1) Updates `pyvista` from 0.47.0 to 0.47.1 - [Release notes](https://github.com/pyvista/pyvista/releases) - [Commits](pyvista/pyvista@v0.47.0...v0.47.1) Updates `vortex-data` from 0.58.0 to 0.60.0 - [Release notes](https://github.com/spiraldb/vortex/releases) - [Commits](vortex-data/vortex@0.58.0...0.60.0) Updates `poethepoet` from 0.41.0 to 0.42.1 - [Release notes](https://github.com/nat-n/poethepoet/releases) - [Commits](nat-n/poethepoet@v0.41.0...v0.42.1) Updates `isort` from 7.0.0 to 8.0.1 - [Release notes](https://github.com/PyCQA/isort/releases) - [Changelog](https://github.com/PyCQA/isort/blob/main/CHANGELOG.md) - [Commits](PyCQA/isort@7.0.0...8.0.1) Updates `jupyterlab` from 4.5.4 to 4.5.5 - [Release notes](https://github.com/jupyterlab/jupyterlab/releases) - [Changelog](https://github.com/jupyterlab/jupyterlab/blob/main/RELEASE.md) - [Commits](https://github.com/jupyterlab/jupyterlab/compare/@jupyterlab/lsp@4.5.4...@jupyterlab/lsp@4.5.5) --- updated-dependencies: - dependency-name: pandas dependency-version: 3.0.1 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: pyarrow dependency-version: 23.0.1 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: pyvista dependency-version: 0.47.1 dependency-type: direct:production update-type: version-update:semver-patch dependency-group: uv - dependency-name: vortex-data dependency-version: 0.60.0 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: poethepoet dependency-version: 0.42.1 dependency-type: direct:development update-type: version-update:semver-minor dependency-group: uv - dependency-name: isort dependency-version: 8.0.1 dependency-type: direct:development update-type: version-update:semver-major dependency-group: uv - dependency-name: jupyterlab dependency-version: 4.5.5 dependency-type: direct:development update-type: version-update:semver-patch dependency-group: uv ... Signed-off-by: dependabot[bot] <support@github.com>

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Bump the uv group with 7 updates#45

Bump the uv group with 7 updates#45
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dependabot bot commented on behalf of github Mar 1, 2026

pandas 3.0.1

Apache Arrow 23.0.1

Apache Arrow 23.0.1 RC0

v0.47.1

What's Changed

Bug fixes or behavior changes

Documentation

Maintenance

Changes

⚠️ Breaks

✨ Features

🚀 Performance

🐛 Bug Fixes

0.42.1

Enhancements

Completion script fixes

New Contributors

0.42.0

Enhancements

New Contributors

8.0.0

Changes

🚀 Features

👷 Continuous Integration

📦 Dependencies

Changelog

Unreleased

8.0.0 February 19 2026

6.1.0 October 1 2025

6.0.1 Febuary 26 2025

6.0.0 January 27 2025

5.13.2 December 13 2023

5.13.1 December 11 2023

5.13.0 December 9 2023

v4.5.5

4.5.5

Bugs fixed

Maintenance and upkeep improvements

Contributors to this release

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